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    Sample vitrification and cryo-EM data acquisition

    Minghao Chen

    Published: 2023-10-17 DOI: 10.17504/protocols.io.kqdg39rreg25/v1
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    Abstract

    Sample vitrification and cryo-EM data acquisition

    Steps

    Sample vitrification

    1.

    Glow-discharge the grids at 25 mA for 30 sec with PELCO easiGlow system (Ted Pella)

    2.

    Apply 3 μl of protein solution to the grid:

    QUANTIFOIL R1.2/1.3 mesh 300 (Electron Microscopy Sciences), or

    QUANTIFOIL R2/1 mesh 300 (Electron Microscopy Sciences)

    3.

    Vitrify the sample with a Vitrobot cryo-plunger (Thermo Fisher Scientific)

    4.

    (Optional) Add 0.05%(w/v) of n-Octyl-Beta-D- Glucopyranoside as a surfactant before vitrification.

    cryo-EM data acquisition at 300 kV Titan Krios microscope

    5.

    Collect dataset at a magnification of 81,000x and a corresponding pixel size of 1.05 Å and a defocus range of -0.8 to -2.0 μm. Image stacks contain 50 frames with a total dose of 50 e/Å2.

    cryo-EM data acquisition at 200 kV Talos Arctica microscope

    6.

    Collect dataset at a magnification of 36,000x and a corresponding pixel size of 0.5575 Å and a defocus range of -0.8 to -2.0 μm in a super-resolution correlated-double sampling mode. Image stacks contain 50 frames with a total dose of 50 e/Å2.

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