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    Stable cell line generation via retrovirus

    Dan Tudorica

    Published: 2024-03-07 DOI: 10.17504/protocols.io.81wgbxq2qlpk/v1
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    Abstract

    Production of pseudotyped virus an subsequent transduction.

    Steps

    1.

    Day 0: Thaw fresh cryovial of cells to be transduced d

    Thaw ~ 1 week prior to planned transduction day, use

    low passage number if possible. Aim for cells to be 80% confluent on day of transduction.

    Recommend seeding four wells of a 12-well plate (100,000 cells/well) the day

    before transduction (after collecting virus).

    Day 1: HEK293T Transfection

    1. Prepare 2 80% confluent 10 cm plates of HEK293T for transfection

    2. Prepare 3 mL of warm Opti-mem solution. Add 10 µg of retro/lentiviral transfection plasmid, 10 µg VSV-G plasmid, and 10 µg pCMV-MLV (if retroviral)[DT1] [DT2] or 10 µg pCMV R8.74 (if lentiviral)

    3. Add 90 µL of LT-1 reagent and swirl.

    4. Incubate at room temperature for 15 minutes.

    5. Add 1.5 mL dropwise to each 10 cm HEK293T plate.

    6. Incubate for 3 days in incubator before harvesting viral particles. If a fluorescent marker was included, it should begin to be visible on days 1,2 post transfection.

    SAFETY: After

    this point all media and plasticware is to be treated as potentially containing

    viral particles. Decontaminate using 10% bleach for 10 minutes before

    discarding as red bag waste. Rinse pipettes with 10% bleach before discarding

    as biohazard waste.

    Day 4: Harvest viral particles

    1. Collect media from both HEK293T plates, combine into one 20 mL portion in a 50 mL falcon tube. Bleach and discard used HEK293T plate.

    2. Spin 50 mL tube containing harvested viral particles in Sorvall for 2 min at 2,000 rpm[DT3] [DT4] to clarify media and pellet stray cells

    3. Aspirate off media without disturbing pellet.

    4. Add 6 mL Lenti-X concentrator solution to 18 mL of recovered media (concentrator is 4x). Invert to mix.

    5. Incubate in refrigerator 1 H – O/N[DT5]

    6. Spin 50 mL conical containing viral particles in centrifuge at 1,500 rcf for 45 min

    7. Remove 2 mL of supernatant from top of pelleted solution and save.

    8. Aspirate off remaining media to recover viral pellet. Bleach excess media.

    9. Resuspend retro/lenti pellet in 2 mL of saved medium.

    10. Titrate concentrated retro/lenti solution into prepared 12-well containing target cells. Recommend 100-200-400-800 µL titration for 4 total attempts at transfection. Typically 400 or 800 uL will yield ~100% transfection efficiency

    11. Return 12-well plate containing transduced cells to incubator.

    Day 5: Check on transduction n

    1. May be able to see fluorescence today.

    2. Swap media to fresh.

    Day 6-7: Check on transduction n

    Day 8-:

    1. Allow cells to grow until almost confluent on 12-well plate. Trypsinize and replate in a 6-well, allow to grow until confluent, then replate in a 10 cm plate.

    2. Split into two 10 cm plates, Freeze one plate down into 4 cryovials the next day to save progress. Label with estimated transduction efficiency if able to measure.

    3. Take other plate and select with antibiotics if able to/necessary, or clonally isolate populations if able to/necessary.

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